MLOC_65226 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000.43933
LEAShoots from the seedlings (10 cm shoot stage)0.2978973.065724.042510.0377
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000.0236211
ROORoots from the seedlings (10 cm shoot stage)0001.09029
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_65226






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65226.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_65226.3CUST_14804_PI427708080AvailableAvailablecontig_49929 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g48050.1 +1 5e-143 414 221/286 (77%) 13107.m05133 protein peroxidase precursor, putative, expressed
TAIR PP10 AT5G05340.1 +1 2e-106 320 172/291 (59%) Peroxidase superfamily protein | chr5:1579142-1580819 REVERSE LENGTH=324