MLOC_65225 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains100.90653.260962.470566.4282
LEAShoots from the seedlings (10 cm shoot stage)4.0706417.469952.915220.0209
INF1Young developing inflorescences (5mm)0.2017450.1363170.1461350.145702
INF2Developing inflorescences (1-1.5 cm)0.205914000.258233
ROORoots from the seedlings (10 cm shoot stage)211.23857.276297.236985.7827
NODDeveloping tillers at six leaf stage, 3rd internode0.220860.2142740.09684580.488172
CAR5Developing grain, bracts removed (5 DPA)000.03559810.0361294
CAR15Developing grain, bracts removed (15 DPA)00.06032100.218007



CDS Structure of MLOC_65225






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65225.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363898NoneNoneNoneNone
MLOC_65225.2CUST_5134_PI427708080AvailableAvailablecontig_49929 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g47990.1 +1 1e-138 404 212/293 (72%) 13107.m05126 protein peroxidase precursor, putative, expressed
TAIR PP10 AT5G05340.1 +1 2e-120 358 185/292 (63%) Peroxidase superfamily protein | chr5:1579142-1580819 REVERSE LENGTH=324