MLOC_65221 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.615081.684671.813511.76241
LEAShoots from the seedlings (10 cm shoot stage)1.594651.519780.7465981.11906
INF1Young developing inflorescences (5mm)1.857072.29832.272011.94524
INF2Developing inflorescences (1-1.5 cm)2.023142.583982.587742.83809
ROORoots from the seedlings (10 cm shoot stage)2.969452.41822.206343.14698
NODDeveloping tillers at six leaf stage, 3rd internode1.520681.765561.429166.18414
CAR5Developing grain, bracts removed (5 DPA)4.554554.824985.1845.14234
CAR15Developing grain, bracts removed (15 DPA)0.6795430.5323680.6389441.52111



CDS Structure of MLOC_65221






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65221.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249777.1NoneNoneNoneNone
MLOC_65221.1CUST_5133_PI427708080AvailableAvailablecontig_49920 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g12530.1 +2 0.0 686 360/419 (86%) 13109.m01134 protein glycosyl transferase, group 1 domain containing protein, expressed
TAIR PP10 AT3G10630.1 +2 4e-167 491 263/408 (64%) UDP-Glycosyltransferase superfamily protein | chr3:3321722-3323185 REVERSE LENGTH=487