MLOC_65216 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains115.948135.259135.069136.548
LEAShoots from the seedlings (10 cm shoot stage)84.289934.946943.495246.3712
INF1Young developing inflorescences (5mm)35.86936.543836.729532.1274
INF2Developing inflorescences (1-1.5 cm)34.116640.11838.511641.9591
ROORoots from the seedlings (10 cm shoot stage)103.551100.10681.533118.96
NODDeveloping tillers at six leaf stage, 3rd internode332.021290.715191.716834.907
CAR5Developing grain, bracts removed (5 DPA)51.781656.987755.100454.7969
CAR15Developing grain, bracts removed (15 DPA)16.827115.542616.218339.6817



CDS Structure of MLOC_65216






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65216.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252807.1NoneNoneNoneNone
MLOC_65216.1CUST_5130_PI427708080AvailableAvailablecontig_49910 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g52370.1 -2 0.0 844 434/488 (89%) 13104.m05365 protein UTP--glucose-1-phosphate uridylyltransferase, putative, expressed
TAIR PP10 AT1G31070.2 -2 0.0 707 354/474 (75%) | Symbols: GlcNAc1pUT1 | N-acetylglucosamine-1-phosphate uridylyltransferase 1 | chr1:11084951-11088361 FORWARD LENGTH=505