- Predicted Gene MLOC_65215
MLOC_65215 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 616.175 | 439.785 | 429.839 | 481.719 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 216.612 | 116.933 | 151.566 | 133.696 |
| INF1 | Young developing inflorescences (5mm) | 704.732 | 725.898 | 772.97 | 597.025 |
| INF2 | Developing inflorescences (1-1.5 cm) | 495.708 | 453.531 | 535.123 | 525.932 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 381.615 | 338.154 | 417.469 | 408.899 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 41.3955 | 37.3659 | 78.0139 | 126.779 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 317.744 | 332.654 | 310.389 | 309.302 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 170.054 | 147.674 | 128.349 | 344.376 |
CDS Structure of MLOC_65215
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65215.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g52361.1 |
+1 |
1e-95 |
287 |
134/145 (92%) |
13104.m05364 protein ribosomal protein S17, putative, expressed |
| TAIR PP10 |
AT3G48930.1 |
+1 |
2e-92 |
278 |
127/145 (88%) |
| Symbols: EMB1080 | Nucleic acid-binding, OB-fold-like protein | chr3:18141017-18142189 REVERSE LENGTH=160 |