MLOC_65198 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains63.164257.343259.106951.5672
LEAShoots from the seedlings (10 cm shoot stage)41.065233.410136.834227.815
INF1Young developing inflorescences (5mm)28.798828.732127.406320.4666
INF2Developing inflorescences (1-1.5 cm)20.927325.726821.666721.6013
ROORoots from the seedlings (10 cm shoot stage)41.02241.558628.924240.9166
NODDeveloping tillers at six leaf stage, 3rd internode27.917526.568822.808976.7839
CAR5Developing grain, bracts removed (5 DPA)46.665645.593348.241637.7904
CAR15Developing grain, bracts removed (15 DPA)9.086099.6033911.523118.73



CDS Structure of MLOC_65198






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65198.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358252NoneNoneNoneNone
MLOC_65198.1NoneAvailableAvailablecontig_49886 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g32020.1 +3 2e-173 522 245/259 (95%) 13104.m03061 protein 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor, putative, expressed
TAIR PP10 AT5G65750.1 +3 1e-164 502 236/259 (91%) 2-oxoglutarate dehydrogenase, E1 component | chr5:26304212-26307947 FORWARD LENGTH=1025