MLOC_65197 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.529543.067332.862572.85424
LEAShoots from the seedlings (10 cm shoot stage)2.244750.3471320.5073090.823732
INF1Young developing inflorescences (5mm)17.623118.626315.340715.5971
INF2Developing inflorescences (1-1.5 cm)22.949425.490322.504927.7136
ROORoots from the seedlings (10 cm shoot stage)3.240853.844473.974614.12207
NODDeveloping tillers at six leaf stage, 3rd internode0.5817250.3158130.06721980.603844
CAR5Developing grain, bracts removed (5 DPA)2.603291.781431.70822.06221
CAR15Developing grain, bracts removed (15 DPA)0.4851350.1932790.7280171.10443



CDS Structure of MLOC_65197






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65197.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367310NoneNoneNoneNone
MLOC_65197.1CUST_5126_PI427708080AvailableAvailablecontig_49885 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g05120.2 -1 4e-112 359 280/388 (72%) 13112.m00513 protein receptor kinase, putative, expressed
TAIR PP10 AT2G36570.1 -1 5e-134 421 213/326 (65%) Leucine-rich repeat protein kinase family protein | chr2:15335583-15337725 FORWARD LENGTH=672