MLOC_6518 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 269.12 | 219.291 | 246.845 | 283.774 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 240.301 | 425.521 | 385.018 | 349.763 |
| INF1 | Young developing inflorescences (5mm) | 106.468 | 112.679 | 115.6 | 108.867 |
| INF2 | Developing inflorescences (1-1.5 cm) | 117.602 | 88.5088 | 110.321 | 126.91 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 258.238 | 208.089 | 292.287 | 330.825 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 359.105 | 230.996 | 199.69 | 825.078 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 72.4619 | 79.1834 | 75.5896 | 87.4457 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 22.4049 | 23.5406 | 19.5189 | 60.3846 |
CDS Structure of MLOC_6518
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6518.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g59790.3 |
+1 |
2e-119 |
347 |
170/181 (94%) |
13101.m06359 protein ADP-ribosylation factor, putative, expressed |
| TAIR PP10 |
AT2G47170.1 |
+1 |
5e-122 |
352 |
173/181 (96%) |
| Symbols: ARF1A1C | Ras-related small GTP-binding family protein | chr2:19367264-19368518 FORWARD LENGTH=181 |
