- Predicted Gene MLOC_65169
MLOC_65169 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_65169_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_65169_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 17.6505 | 40.3281 | 34.1078 | 35.3906 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 35.7816 | 38.067 | 32.6401 | 32.4497 |
INF1 | Young developing inflorescences (5mm) | 70.042 | 76.1329 | 74.2555 | 63.3523 |
INF2 | Developing inflorescences (1-1.5 cm) | 111.058 | 106.844 | 96.0464 | 120.841 |
ROO | Roots from the seedlings (10 cm shoot stage) | 18.5846 | 37.0578 | 25.8524 | 44.9034 |
NOD | Developing tillers at six leaf stage, 3rd internode | 18.4208 | 24.7607 | 29.7317 | 90.0099 |
CAR5 | Developing grain, bracts removed (5 DPA) | 60.4757 | 53.6969 | 57.7842 | 58.7424 |
CAR15 | Developing grain, bracts removed (15 DPA) | 37.6627 | 35.5771 | 34.9767 | 85.2595 |
CDS Structure of MLOC_65169
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65169.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g01020.2 |
+3 |
0.0 |
1565 |
914/1290 (71%) |
13105.m00008 protein transcriptional repressor, putative, expressed |
TAIR PP10 |
AT3G01320.1 |
+3 |
0.0 |
984 |
629/1397 (45%) |
| Symbols: SNL1 | SIN3-like 1 | chr3:106730-113197 FORWARD LENGTH=1372 |