MLOC_65166 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.09539070.03950.05228880.0562466
LEAShoots from the seedlings (10 cm shoot stage)0.061391800.1482670.0852008
INF1Young developing inflorescences (5mm)000.03773390.0331049
INF2Developing inflorescences (1-1.5 cm)000.03706040.0313942
ROORoots from the seedlings (10 cm shoot stage)2.426690.5871052.314851.12116
NODDeveloping tillers at six leaf stage, 3rd internode00.02151220.02115560.0890433
CAR5Developing grain, bracts removed (5 DPA)1.1241.030791.071111.11135
CAR15Developing grain, bracts removed (15 DPA)1.021340.8622591.318232.71568



CDS Structure of MLOC_65166






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65166.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_65166.2CUST_14798_PI427708080AvailableAvailablecontig_49840 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g47620.1 +2 2e-73 231 114/160 (71%) 13107.m05077 protein universal stress protein domain containing protein, putative, expressed
TAIR PP10 AT2G47710.1 +2 5e-49 167 88/156 (56%) Adenine nucleotide alpha hydrolases-like superfamily protein | chr2:19555045-19555956 REVERSE LENGTH=162