MLOC_65135 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.404640.3630140.3683790.396026
LEAShoots from the seedlings (10 cm shoot stage)0.1667020.5143930.8209290.448184
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)4.688631.357440.8629461.92488
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)000.04234880.0861208
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_65135






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65135.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366544NoneNoneNoneNone
MLOC_65135.1CUST_5115_PI427708080AvailableAvailablecontig_49795 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g20610.1 +1 0.0 728 357/567 (63%) 13110.m01694 protein laccase-15 precursor, putative, expressed
TAIR PP10 AT3G09220.1 +1 2e-161 480 245/566 (43%) | Symbols: LAC7 | laccase 7 | chr3:2827434-2830477 REVERSE LENGTH=567