MLOC_65133 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains290.195337.879335.428308.556
LEAShoots from the seedlings (10 cm shoot stage)56.270377.08696.340555.834
INF1Young developing inflorescences (5mm)61.578862.991452.151950.9767
INF2Developing inflorescences (1-1.5 cm)35.575440.512332.745841.13
ROORoots from the seedlings (10 cm shoot stage)83.525278.208781.58378.7563
NODDeveloping tillers at six leaf stage, 3rd internode17.256921.768215.478851.3412
CAR5Developing grain, bracts removed (5 DPA)91.226290.211389.356488.8128
CAR15Developing grain, bracts removed (15 DPA)14.773917.158713.794437.6312



CDS Structure of MLOC_65133






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369753
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369753CUST_21844_PI427708080NoneNoneNone
MLOC_1331.1NoneAvailableNonecontig_11170 (Mapped)
MLOC_21826.1NoneAvailableNonecontig_1599192 (Mapped)
MLOC_33581.1NoneAvailableNonecontig_238634 (Mapped)
MLOC_41524.1NoneAvailableNonecontig_2592815 (Mapped)
MLOC_49669.1NoneAvailableNonecontig_345900 (Not mapped)
MLOC_52466.1NoneAvailableNonecontig_37547 (Mapped)
MLOC_65133.1NoneAvailableAvailablecontig_49792 (Mapped)
MLOC_71398.1NoneAvailableNonecontig_59756 (Mapped)
MLOC_76501.1NoneAvailableNonecontig_71602 (Not mapped)
MLOC_9550.1NoneAvailableNonecontig_153371 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----