MLOC_65109 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.613949.855410.10598.7051
LEAShoots from the seedlings (10 cm shoot stage)5.462914.908794.081454.08311
INF1Young developing inflorescences (5mm)4.477295.096655.435634.02647
INF2Developing inflorescences (1-1.5 cm)5.224425.386235.541245.67699
ROORoots from the seedlings (10 cm shoot stage)3.890245.444284.727946.17417
NODDeveloping tillers at six leaf stage, 3rd internode2.955913.873522.9317712.8237
CAR5Developing grain, bracts removed (5 DPA)5.073825.638164.841854.9328
CAR15Developing grain, bracts removed (15 DPA)3.44612.829653.85457.16664



CDS Structure of MLOC_65109






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65109.6
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366480NoneNoneNoneNone
MLOC_65109.6CUST_5109_PI427708080AvailableAvailablecontig_49759 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g34300.1 -2 0.0 765 391/528 (74%) 13109.m03446 protein Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed
TAIR PP10 AT2G43980.1 -2 2e-129 412 228/495 (46%) | Symbols: AtITPK4, ITPK4 | inositol 1,3,4-trisphosphate 5/6-kinase 4 | chr2:18208437-18211604 REVERSE LENGTH=488