MLOC_65103 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains44.886755.173859.453854.2022
LEAShoots from the seedlings (10 cm shoot stage)94.40492.800884.655277.7511
INF1Young developing inflorescences (5mm)77.840668.045170.209561.6841
INF2Developing inflorescences (1-1.5 cm)56.986868.062770.300371.4709
ROORoots from the seedlings (10 cm shoot stage)52.927146.682847.974657.525
NODDeveloping tillers at six leaf stage, 3rd internode172.786128.758124.902420.265
CAR5Developing grain, bracts removed (5 DPA)112.97397.0887.62797.0931
CAR15Developing grain, bracts removed (15 DPA)14.781814.184114.371533.5104



CDS Structure of MLOC_65103






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65103.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362791NoneNoneNoneNone
MLOC_65103.2CUST_5108_PI427708080AvailableAvailablecontig_49756 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g53190.2 -1 0.0 886 457/482 (95%) 13104.m05467 protein CPuORF12 - conserved peptide uORF-containing transcript, expressed
TAIR PP10 AT2G43020.1 -1 0.0 694 352/491 (72%) | Symbols: ATPAO2, PAO2 | polyamine oxidase 2 | chr2:17891945-17894440 FORWARD LENGTH=490