MLOC_65087 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains70.8306103.81298.988988.5487
LEAShoots from the seedlings (10 cm shoot stage)87.481347.757644.342952.7619
INF1Young developing inflorescences (5mm)68.548759.902955.792948.2881
INF2Developing inflorescences (1-1.5 cm)43.711953.389449.07450.2468
ROORoots from the seedlings (10 cm shoot stage)37.258773.427761.611281.333
NODDeveloping tillers at six leaf stage, 3rd internode91.131259.25840.8062208.24
CAR5Developing grain, bracts removed (5 DPA)98.740799.5621104.56892.0979
CAR15Developing grain, bracts removed (15 DPA)36.299430.657329.537768.8674



CDS Structure of MLOC_65087






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65087.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_65087.2CUST_14787_PI427708080AvailableAvailablecontig_49735 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g11840.2 +2 0.0 767 422/503 (84%) 13102.m01284 protein coatomer subunit beta-2, putative, expressed
TAIR PP10 AT3G15980.3 +2 0.0 669 352/500 (70%) Coatomer, beta subunit | chr3:5412015-5418313 REVERSE LENGTH=918