- Predicted Gene MLOC_65081
MLOC_65081 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.375887 | 0.624674 | 0.419337 | 0.562872 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.1831 | 21.9686 | 20.0085 | 14.4694 |
| INF1 | Young developing inflorescences (5mm) | 3.61652 | 3.0105 | 3.08509 | 3.07136 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.756 | 4.05508 | 4.6197 | 5.05146 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.341399 | 0.745932 | 2.41534 | 1.129 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.5656 | 1.67174 | 2.571 | 5.06581 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 11.7353 | 16.3021 | 15.0649 | 16.1696 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.8744 | 2.28529 | 2.26706 | 5.92969 |
CDS Structure of MLOC_65081
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65081.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g23550.1 |
-2 |
0.0 |
548 |
292/365 (80%) |
13109.m02226 protein dehydrogenase, putative, expressed |
| TAIR PP10 |
AT4G37980.1 |
-2 |
1e-133 |
397 |
214/344 (62%) |
| Symbols: ELI3-1, ELI3, ATCAD7, CAD7 | elicitor-activated gene 3-1 | chr4:17852670-17854302 FORWARD LENGTH=357 |
