- Predicted Gene MLOC_65066
MLOC_65066 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 20.1477 | 23.3705 | 20.255 | 24.045 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 450.894 | 753.226 | 939.091 | 607.728 |
| INF1 | Young developing inflorescences (5mm) | 27.6707 | 23.2591 | 30.1865 | 25.7399 |
| INF2 | Developing inflorescences (1-1.5 cm) | 19.251 | 23.8663 | 28.5701 | 29.8696 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.71568 | 6.99475 | 16.2754 | 9.65039 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 306.01 | 394.236 | 633.008 | 1280.3 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 150.755 | 175.924 | 150.575 | 182.26 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 21.726 | 25.6699 | 23.7423 | 65.7117 |
CDS Structure of MLOC_65066
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65066.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g37240.1 |
-3 |
5e-173 |
494 |
245/276 (89%) |
13107.m03830 protein chlorophyll A-B binding protein, putative, expressed |
| TAIR PP10 |
AT5G01530.1 |
-3 |
8e-157 |
452 |
228/275 (83%) |
| Symbols: LHCB4.1 | light harvesting complex photosystem II | chr5:209084-210243 FORWARD LENGTH=290 |
