MLOC_65064 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.0194940.04755260.02532040.0319281
INF2Developing inflorescences (1-1.5 cm)0.04160480.020361900.0448791
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.02800900.181496
CAR5Developing grain, bracts removed (5 DPA)0.0254655000.0234599
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_65064






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65064.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373719NoneNoneNoneNone
MLOC_65064.1CUST_7005_PI427708080AvailableAvailablecontig_49700 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g51370.1 +2 0.0 625 313/482 (65%) 13106.m05549 protein OsSCP38 - Putative Serine Carboxypeptidase homologue
TAIR PP10 AT5G23210.1 +2 0.0 523 256/472 (54%) | Symbols: SCPL34 | serine carboxypeptidase-like 34 | chr5:7810892-7814837 FORWARD LENGTH=499