- Predicted Gene MLOC_65054
MLOC_65054 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_65054_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_65054_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.0447783 | 0.146791 | 0.124776 | 0.137847 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0583051 | 0.23548 | 0 | 0.140705 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0155205 | 0 | 0.0193468 | 0.0328548 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.0839015 | 0.114497 | 0.152575 | 0.14681 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0909737 | 0.0662182 | 0 | 0.208737 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.84599 | 2.98222 | 3.01804 | 3.52474 |
CAR15 | Developing grain, bracts removed (15 DPA) | 39.2559 | 36.0919 | 33.1157 | 95.4652 |
CDS Structure of MLOC_65054
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65054.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g48229.1 |
+1 |
7e-36 |
145 |
68/78 (87%) |
13107.m05155 protein vacuolar-sorting receptor precursor, putative, expressed |
TAIR PP10 |
AT2G30290.1 |
+1 |
1e-28 |
122 |
55/78 (71%) |
| Symbols: VSR2, VSR1;2, BP80-1;2, AtVSR2 | VACUOLAR SORTING RECEPTOR 2 | chr2:12912890-12915781 REVERSE LENGTH=625 |