MLOC_65053 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains226.898166.537151.266158.484
LEAShoots from the seedlings (10 cm shoot stage)56.24343.431168.098539.6015
INF1Young developing inflorescences (5mm)59.429260.759870.092549.9936
INF2Developing inflorescences (1-1.5 cm)34.593246.764145.220843.3171
ROORoots from the seedlings (10 cm shoot stage)245.387154.489164.929159.723
NODDeveloping tillers at six leaf stage, 3rd internode118.01489.963151.6255186.628
CAR5Developing grain, bracts removed (5 DPA)94.5415116.87192.079892.7192
CAR15Developing grain, bracts removed (15 DPA)29.915725.277221.343160.1075



CDS Structure of MLOC_65053






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65053.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376088NoneNoneNoneNone
MLOC_65053.1CUST_5099_PI427708080AvailableAvailablecontig_49686 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g48244.1 +2 8e-18 76 34/41 (83%) 13107.m05156 protein ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed
TAIR PP10None-----