- Predicted Gene MLOC_65048
MLOC_65048 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_65048_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_65048_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 234.396 | 225.234 | 210.308 | 254.484 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 153.463 | 116.949 | 119.63 | 123.519 |
INF1 | Young developing inflorescences (5mm) | 359.474 | 343.127 | 330.674 | 328.632 |
INF2 | Developing inflorescences (1-1.5 cm) | 219.631 | 244.138 | 252.646 | 288.858 |
ROO | Roots from the seedlings (10 cm shoot stage) | 150.929 | 224.926 | 326.899 | 306.103 |
NOD | Developing tillers at six leaf stage, 3rd internode | 34.4656 | 16.7323 | 39.5054 | 79.1755 |
CAR5 | Developing grain, bracts removed (5 DPA) | 131.909 | 144.428 | 122.614 | 144.457 |
CAR15 | Developing grain, bracts removed (15 DPA) | 33.5037 | 35.0285 | 26.4719 | 83.263 |
CDS Structure of MLOC_65048
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65048.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g38520.4 |
+3 |
3e-63 |
194 |
98/102 (96%) |
13105.m10387 protein 60S ribosomal protein L36-2, putative, expressed |
TAIR PP10 |
AT3G53740.4 |
+3 |
4e-53 |
168 |
84/102 (82%) |
Ribosomal protein L36e family protein | chr3:19913921-19914813 REVERSE LENGTH=112 |