- Predicted Gene MLOC_65042
MLOC_65042 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_65042_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_65042_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 19.5344 | 24.2006 | 26.2197 | 21.2824 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 808.193 | 89.6299 | 322.322 | 334.718 |
INF1 | Young developing inflorescences (5mm) | 1.38482 | 0.122752 | 0.171896 | 0.490227 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0265436 | 0 | 0.132926 | 0.0663712 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.58573 | 2.53264 | 7.42149 | 3.14977 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.441375 | 0.106679 | 0.0264587 | 0.247399 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.165598 | 0.123536 | 0.0334878 | 0.103103 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.534604 | 0.559114 | 0.729763 | 1.32156 |
CDS Structure of MLOC_65042
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65042.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g40260.1 |
+2 |
3e-154 |
454 |
262/430 (61%) |
13102.m04482 protein uncharacterized protein At4g06744 precursor, putative, expressed |
TAIR PP10 |
AT4G06744.1 |
+2 |
2e-76 |
251 |
152/345 (44%) |
Leucine-rich repeat (LRR) family protein | chr4:4070870-4072084 REVERSE LENGTH=404 |