MLOC_65042 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.534424.200626.219721.2824
LEAShoots from the seedlings (10 cm shoot stage)808.19389.6299322.322334.718
INF1Young developing inflorescences (5mm)1.384820.1227520.1718960.490227
INF2Developing inflorescences (1-1.5 cm)0.026543600.1329260.0663712
ROORoots from the seedlings (10 cm shoot stage)2.585732.532647.421493.14977
NODDeveloping tillers at six leaf stage, 3rd internode0.4413750.1066790.02645870.247399
CAR5Developing grain, bracts removed (5 DPA)0.1655980.1235360.03348780.103103
CAR15Developing grain, bracts removed (15 DPA)0.5346040.5591140.7297631.32156



CDS Structure of MLOC_65042






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65042.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249347.1NoneNoneNoneNone
MLOC_65042.1CUST_5096_PI427708080AvailableAvailablecontig_49666 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g40260.1 +2 3e-154 454 262/430 (61%) 13102.m04482 protein uncharacterized protein At4g06744 precursor, putative, expressed
TAIR PP10 AT4G06744.1 +2 2e-76 251 152/345 (44%) Leucine-rich repeat (LRR) family protein | chr4:4070870-4072084 REVERSE LENGTH=404