- Predicted Gene MLOC_65040
MLOC_65040 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 16.7018 | 13.9566 | 16.4065 | 14.7555 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 30.7939 | 9.19507 | 15.7148 | 14.1313 |
INF1 | Young developing inflorescences (5mm) | 0.767327 | 0.725788 | 0.541648 | 0.605334 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.69291 | 1.45612 | 1.55597 | 1.76138 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.3406 | 16.007 | 12.0559 | 14.9101 |
NOD | Developing tillers at six leaf stage, 3rd internode | 95.4291 | 151.359 | 127.876 | 331.916 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.57639 | 1.85515 | 2.37134 | 2.53702 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0176686 | 0.0629224 | 0.0759155 | 0.146064 |
CDS Structure of MLOC_65040
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65040.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g02780.1 |
+3 |
7e-157 |
466 |
268/484 (55%) |
13106.m00210 protein aspartic protease, putative, expressed |
TAIR PP10 |
AT5G10770.1 |
+3 |
2e-62 |
217 |
166/471 (35%) |
Eukaryotic aspartyl protease family protein | chr5:3403331-3405331 REVERSE LENGTH=474 |