MLOC_65022 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.047053.876975.582334.0052
LEAShoots from the seedlings (10 cm shoot stage)1.62160.5971851.258390.91748
INF1Young developing inflorescences (5mm)0.9847520.5782370.5787830.61989
INF2Developing inflorescences (1-1.5 cm)2.021130.8161330.4857131.26056
ROORoots from the seedlings (10 cm shoot stage)2.577171.970682.151182.16632
NODDeveloping tillers at six leaf stage, 3rd internode0.8252770.009614410.2657470.188785
CAR5Developing grain, bracts removed (5 DPA)20.786124.895916.150819.6656
CAR15Developing grain, bracts removed (15 DPA)11264.58167.388536.3422745.4



CDS Structure of MLOC_65022






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65022.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251933.1NoneNoneNoneNone
MLOC_65022.1CUST_5095_PI427708080AvailableAvailablecontig_49644 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g12080.1 +3 4e-26 103 71/162 (44%) 13107.m01242 protein LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
TAIR PP10None-----