- Predicted Gene MLOC_65017
MLOC_65017 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 34.0609 | 24.9227 | 29.6535 | 29.9094 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 12.8284 | 4.63874 | 7.72429 | 7.61874 |
| INF1 | Young developing inflorescences (5mm) | 28.7849 | 23.7727 | 22.6069 | 21.9878 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.11716 | 9.12662 | 9.32129 | 10.3142 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 18.0448 | 20.7069 | 32.8731 | 28.3058 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.37674 | 0.716632 | 1.09934 | 2.63186 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 21.6966 | 22.9022 | 20.9245 | 22.3932 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.93222 | 3.26988 | 2.06834 | 6.6841 |
CDS Structure of MLOC_65017
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65017.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g42380.1 |
-3 |
9e-103 |
303 |
145/159 (91%) |
13104.m04179 protein ribosomal protein S17, putative, expressed |
| TAIR PP10 |
AT3G48930.1 |
-3 |
7e-97 |
287 |
135/161 (84%) |
| Symbols: EMB1080 | Nucleic acid-binding, OB-fold-like protein | chr3:18141017-18142189 REVERSE LENGTH=160 |