MLOC_64988 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.823585.926215.615866.05493
LEAShoots from the seedlings (10 cm shoot stage)3.856593.009875.069983.18094
INF1Young developing inflorescences (5mm)4.709046.70767.438665.37607
INF2Developing inflorescences (1-1.5 cm)5.916456.325257.068777.15012
ROORoots from the seedlings (10 cm shoot stage)8.916096.736487.415327.91586
NODDeveloping tillers at six leaf stage, 3rd internode4.237236.399.5470619.9522
CAR5Developing grain, bracts removed (5 DPA)7.020229.598897.985038.34982
CAR15Developing grain, bracts removed (15 DPA)1.575511.047411.380423.28104



CDS Structure of MLOC_64988






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64988.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353597NoneNoneNoneNone
MLOC_64988.1CUST_5088_PI427708080AvailableAvailablecontig_49599 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g04440.1 +1 4e-67 213 126/194 (65%) 13111.m00400 protein expressed protein
TAIR PP10 AT2G41600.3 +1 7e-22 92 61/156 (39%) Mitochondrial glycoprotein family protein | chr2:17345597-17346701 REVERSE LENGTH=207