MLOC_64975 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.18428.171678.639998.15335
LEAShoots from the seedlings (10 cm shoot stage)9.3483410.897311.74178.72097
INF1Young developing inflorescences (5mm)8.78478.90337.828497.28436
INF2Developing inflorescences (1-1.5 cm)8.961977.411697.785758.82436
ROORoots from the seedlings (10 cm shoot stage)11.441311.43810.322812.78
NODDeveloping tillers at six leaf stage, 3rd internode11.153510.06449.994129.1564
CAR5Developing grain, bracts removed (5 DPA)7.215288.170667.193447.34433
CAR15Developing grain, bracts removed (15 DPA)5.903115.486565.2063713.3034



CDS Structure of MLOC_64975






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64975.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365546NoneNoneNoneNone
MLOC_64975.2CUST_5084_PI427708080AvailableAvailablecontig_49586 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g48370.1 +1 0.0 547 312/357 (87%) 13101.m05016 protein OsFBT1 - F-box and tubby domain containing protein, expressed
TAIR PP10 AT1G53320.1 +1 2e-130 401 222/337 (66%) | Symbols: AtTLP7, TLP7 | tubby like protein 7 | chr1:19891237-19893429 REVERSE LENGTH=379