MLOC_64966 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.22342.524382.96562.82889
LEAShoots from the seedlings (10 cm shoot stage)0.1691520.3349350.2630710.243787
INF1Young developing inflorescences (5mm)0.08461870.03322450.07262560.0582178
INF2Developing inflorescences (1-1.5 cm)00.028482200.0546976
ROORoots from the seedlings (10 cm shoot stage)8.442333.949526.314865.60557
NODDeveloping tillers at six leaf stage, 3rd internode0.1978480.26857700.917925
CAR5Developing grain, bracts removed (5 DPA)1.27811.391860.8135031.29596
CAR15Developing grain, bracts removed (15 DPA)0.5799470.7056770.6141611.75294



CDS Structure of MLOC_64966






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64966.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64966.1CUST_14769_PI427708080AvailableAvailablecontig_49572 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g02130.1 +2 1e-165 472 226/291 (78%) 13111.m00133 protein peroxidase precursor, putative, expressed
TAIR PP10 AT5G05340.1 +2 5e-131 383 185/291 (64%) Peroxidase superfamily protein | chr5:1579142-1580819 REVERSE LENGTH=324