- Predicted Gene MLOC_64948
MLOC_64948 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.56628 | 5.47914 | 5.58486 | 5.53281 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.20135 | 5.10712 | 0.849962 | 3.1917 |
INF1 | Young developing inflorescences (5mm) | 1.36528 | 0.65666 | 1.29835 | 0.992066 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.611028 | 0.83785 | 1.49763 | 1.12487 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.379583 | 1.52732 | 0.0844959 | 1.40979 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0143738 | 0.0771676 | 0 | 0.210988 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.59228 | 4.05406 | 3.85559 | 4.22517 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_64948
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64948.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g28060.1 |
+3 |
0.0 |
671 |
381/522 (73%) |
13110.m02375 protein 3-ketoacyl-CoA synthase, putative, expressed |
TAIR PP10 |
AT2G26640.1 |
+3 |
0.0 |
531 |
246/390 (63%) |
| Symbols: KCS11 | 3-ketoacyl-CoA synthase 11 | chr2:11330094-11331623 FORWARD LENGTH=509 |