MLOC_64948 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.566285.479145.584865.53281
LEAShoots from the seedlings (10 cm shoot stage)6.201355.107120.8499623.1917
INF1Young developing inflorescences (5mm)1.365280.656661.298350.992066
INF2Developing inflorescences (1-1.5 cm)0.6110280.837851.497631.12487
ROORoots from the seedlings (10 cm shoot stage)0.3795831.527320.08449591.40979
NODDeveloping tillers at six leaf stage, 3rd internode0.01437380.077167600.210988
CAR5Developing grain, bracts removed (5 DPA)3.592284.054063.855594.22517
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_64948






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64948.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357799NoneNoneNoneNone
MLOC_64948.1CUST_5079_PI427708080AvailableAvailablecontig_49553 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g28060.1 +3 0.0 671 381/522 (73%) 13110.m02375 protein 3-ketoacyl-CoA synthase, putative, expressed
TAIR PP10 AT2G26640.1 +3 0.0 531 246/390 (63%) | Symbols: KCS11 | 3-ketoacyl-CoA synthase 11 | chr2:11330094-11331623 FORWARD LENGTH=509