MLOC_64945 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.166432.447292.32442.54345
LEAShoots from the seedlings (10 cm shoot stage)2.279470.5910911.727141.21013
INF1Young developing inflorescences (5mm)0.011896000.010668
INF2Developing inflorescences (1-1.5 cm)0.0128509000.0162641
ROORoots from the seedlings (10 cm shoot stage)8.882045.98455.461116.69903
NODDeveloping tillers at six leaf stage, 3rd internode5.104083.497320.1186816.81218
CAR5Developing grain, bracts removed (5 DPA)0.4701880.618640.6926010.622411
CAR15Developing grain, bracts removed (15 DPA)0.03186790.03781660.03035240.0930629



CDS Structure of MLOC_64945






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64945.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357668NoneNoneNoneNone
MLOC_64945.1CUST_5078_PI427708080AvailableAvailablecontig_49548 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g36010.1 +2 0.0 1125 567/726 (78%) 13105.m03774 protein OsSub47 - Putative Subtilisin homologue, expressed
TAIR PP10 AT5G67360.1 +2 0.0 573 331/737 (45%) | Symbols: ARA12 | Subtilase family protein | chr5:26872192-26874465 REVERSE LENGTH=757