MLOC_64943 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.125918.166618.194517.9041
LEAShoots from the seedlings (10 cm shoot stage)209.356313.709330.255248.783
INF1Young developing inflorescences (5mm)9.64468.483948.348387.75895
INF2Developing inflorescences (1-1.5 cm)8.943919.4290810.361910.6808
ROORoots from the seedlings (10 cm shoot stage)20.765222.10618.514626.8076
NODDeveloping tillers at six leaf stage, 3rd internode34.322257.445263.1265194.273
CAR5Developing grain, bracts removed (5 DPA)20.070720.052217.235719.3026
CAR15Developing grain, bracts removed (15 DPA)3.941684.735213.314329.96677



CDS Structure of MLOC_64943






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64943.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362500NoneNoneNoneNone
MLOC_64943.1CUST_5077_PI427708080AvailableAvailablecontig_49546 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g37619.1 -1 0.0 990 487/566 (86%) 13104.m03593 protein zeaxanthin epoxidase, chloroplast precursor, putative, expressed
TAIR PP10 AT5G67030.1 -1 0.0 816 391/553 (71%) | Symbols: ABA1, LOS6, NPQ2, ATABA1, ZEP, IBS3, ATZEP | zeaxanthin epoxidase (ZEP) (ABA1) | chr5:26753745-26757090 REVERSE LENGTH=667