MLOC_64938 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.711877.499546.34167.34546
LEAShoots from the seedlings (10 cm shoot stage)4.860284.613966.729774.23683
INF1Young developing inflorescences (5mm)3.640933.410693.850663.25461
INF2Developing inflorescences (1-1.5 cm)2.511333.183372.814913.32856
ROORoots from the seedlings (10 cm shoot stage)9.918796.772155.340167.5686
NODDeveloping tillers at six leaf stage, 3rd internode5.431710.676912.32629.6315
CAR5Developing grain, bracts removed (5 DPA)11.616310.32810.276811.0198
CAR15Developing grain, bracts removed (15 DPA)0.4874260.7318520.5270681.5182



CDS Structure of MLOC_64938






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64938.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361943NoneNoneNoneNone
MLOC_64938.1CUST_5074_PI427708080AvailableAvailablecontig_49535 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g32820.1 +1 0.0 731 394/542 (73%) 13105.m03383 protein peptide-N4-asparagine amidase A, putative, expressed
TAIR PP10 AT5G05480.1 +1 3e-134 417 231/500 (46%) Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein | chr5:1622338-1624164 REVERSE LENGTH=608