MLOC_64937 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.70458.894628.8020410.1591
LEAShoots from the seedlings (10 cm shoot stage)0.04317950.099016100.0914784
INF1Young developing inflorescences (5mm)0.0442561000.040548
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)28.952923.470522.246730.4453
NODDeveloping tillers at six leaf stage, 3rd internode0.05542820.07097550.007475110.182018
CAR5Developing grain, bracts removed (5 DPA)0.08512280.3174790.3045990.277059
CAR15Developing grain, bracts removed (15 DPA)1.969121.913151.111124.66175



CDS Structure of MLOC_64937






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64937.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64937.1CUST_8771_PI427708083AvailableAvailablecontig_49530 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g48460.1 -2 1e-163 475 240/389 (62%) 13107.m05189 protein stress responsive protein, putative, expressed
TAIR PP10 AT2G39050.1 -2 5e-61 206 95/166 (57%) hydroxyproline-rich glycoprotein family protein | chr2:16303427-16305336 FORWARD LENGTH=317