MLOC_64936 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.820693.145452.017042.74256
LEAShoots from the seedlings (10 cm shoot stage)1.847970.259840.67940.75704
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)4.54832.167564.589133.14795
NODDeveloping tillers at six leaf stage, 3rd internode0.2053020.5186810.112551.16198
CAR5Developing grain, bracts removed (5 DPA)00.018913800.0268906
CAR15Developing grain, bracts removed (15 DPA)1.474570.6770321.265892.95999



CDS Structure of MLOC_64936






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64936.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363770NoneNoneNoneNone
MLOC_64936.1CUST_5073_PI427708080AvailableAvailablecontig_49529 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g10478.1 +3 0.0 903 435/555 (78%) 13103.m01175 protein glycosyl hydrolase family 10 protein, putative, expressed
TAIR PP10 AT4G33840.1 +3 0.0 569 285/551 (52%) Glycosyl hydrolase family 10 protein | chr4:16223694-16226095 REVERSE LENGTH=576