MLOC_64933 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.482650.4159150.3093360.381364
LEAShoots from the seedlings (10 cm shoot stage)0.36730900.6877970.292364
INF1Young developing inflorescences (5mm)1.184371.420661.222660.985038
INF2Developing inflorescences (1-1.5 cm)1.798253.460221.700712.55584
ROORoots from the seedlings (10 cm shoot stage)00.2338200.170159
NODDeveloping tillers at six leaf stage, 3rd internode00.02821730.05989970.0933284
CAR5Developing grain, bracts removed (5 DPA)1.041040.37640.4429450.542715
CAR15Developing grain, bracts removed (15 DPA)00.2144350.6013420.400163



CDS Structure of MLOC_64933






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64933.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64933.1NoneAvailableAvailablecontig_49529 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g17150.1 +2 7e-18 64 30/51 (59%) 13111.m01737 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----