- Predicted Gene MLOC_64932
MLOC_64932 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.03259 | 4.90936 | 4.04881 | 4.87681 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.89572 | 4.421 | 4.13456 | 3.61003 |
| INF1 | Young developing inflorescences (5mm) | 9.09764 | 11.4066 | 10.4843 | 8.94739 |
| INF2 | Developing inflorescences (1-1.5 cm) | 10.5138 | 10.7678 | 10.3582 | 12.2704 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.58446 | 4.98922 | 4.26733 | 6.31539 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.49472 | 1.9077 | 5.13734 | 8.11189 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.82993 | 6.54732 | 6.43285 | 6.62292 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.24776 | 1.15201 | 1.22665 | 2.91589 |
CDS Structure of MLOC_64932
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64932.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g10460.1 |
+2 |
0.0 |
523 |
289/363 (80%) |
13103.m01171 protein expressed protein |
| TAIR PP10 |
AT2G18410.1 |
+2 |
3e-74 |
244 |
147/365 (40%) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone acetylation protein 2 (InterPro:IPR019519); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:7990768-7992588 FORWARD LENGTH=374 |
