MLOC_64926 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.204944000.187749
LEAShoots from the seedlings (10 cm shoot stage)0.04386370.04800280.04258650.0422978
INF1Young developing inflorescences (5mm)0.0229928000.0215615
INF2Developing inflorescences (1-1.5 cm)00.04056520.05663160.0769936
ROORoots from the seedlings (10 cm shoot stage)0.2122980.057321100.168333
NODDeveloping tillers at six leaf stage, 3rd internode0.02060480.03719160.01536370.128048
CAR5Developing grain, bracts removed (5 DPA)0.104235000.124539
CAR15Developing grain, bracts removed (15 DPA)00.025529600.0861956



CDS Structure of MLOC_64926






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64926.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373132NoneNoneNoneNone
MLOC_64926.1CUST_7004_PI427708080AvailableAvailablecontig_49518 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g42260.1 +1 2e-103 319 163/316 (52%) 13104.m04164 protein protein phosphatase 2C, putative, expressed
TAIR PP10 AT2G25070.1 +1 3e-76 248 145/363 (40%) Protein phosphatase 2C family protein | chr2:10663517-10665366 REVERSE LENGTH=355