MLOC_64920 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains46.779944.450546.749944.0445
LEAShoots from the seedlings (10 cm shoot stage)184.846217.876169.726150.981
INF1Young developing inflorescences (5mm)5.174335.64726.878684.91581
INF2Developing inflorescences (1-1.5 cm)9.687719.2055810.934110.7358
ROORoots from the seedlings (10 cm shoot stage)91.498672.112850.383581.9852
NODDeveloping tillers at six leaf stage, 3rd internode45.845638.977655.8233126.041
CAR5Developing grain, bracts removed (5 DPA)52.100351.860557.370452.3489
CAR15Developing grain, bracts removed (15 DPA)19.765225.253122.169551.6615



CDS Structure of MLOC_64920






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64920.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355502NoneNoneNoneNone
MLOC_64920.3CUST_5069_PI427708080AvailableAvailablecontig_49509 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g17470.1 -1 2e-146 421 244/304 (80%) 13103.m02084 protein IN2-1 protein, putative, expressed
TAIR PP10 AT5G02790.1 -1 5e-91 276 128/211 (61%) | Symbols: GSTL3 | Glutathione S-transferase family protein | chr5:632877-634858 FORWARD LENGTH=235