MLOC_64919 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.06294460.0815170.106465
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)01.239950.6105132.26377
NODDeveloping tillers at six leaf stage, 3rd internode000.01792820.0471461
CAR5Developing grain, bracts removed (5 DPA)0.05940730.056772400.0704552
CAR15Developing grain, bracts removed (15 DPA)3.626322.847272.320838.72186



CDS Structure of MLOC_64919






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64919.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372395NoneNoneNoneNone
MLOC_64919.1CUST_5068_PI427708080AvailableAvailablecontig_49508 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g04100.1 -2 3e-60 189 95/122 (78%) 13109.m00332 protein expressed protein
TAIR PP10 AT4G31830.1 -2 3e-23 92 51/95 (54%) unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:15400803-15401105 REVERSE LENGTH=100