MLOC_64918 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains65.314266.313437.967654.6255
LEAShoots from the seedlings (10 cm shoot stage)24.37585.782375.592269.37777
INF1Young developing inflorescences (5mm)9.784516.069314.286211.5268
INF2Developing inflorescences (1-1.5 cm)24.486519.122219.73523.0382
ROORoots from the seedlings (10 cm shoot stage)152.138105.054105.207108.334
NODDeveloping tillers at six leaf stage, 3rd internode9.9189410.75790.38991919.1883
CAR5Developing grain, bracts removed (5 DPA)4.97630.7633970.9372142.07984
CAR15Developing grain, bracts removed (15 DPA)0.5265590.4889750.7801121.40111



CDS Structure of MLOC_64918






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64918.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64918.1CUST_14764_PI427708080AvailableAvailablecontig_49507 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g36924.1 +2 6e-159 466 250/274 (91%) 13110.m03350 protein aquaporin protein, putative, expressed
TAIR PP10 AT4G10380.1 +2 3e-121 367 204/273 (75%) | Symbols: NIP5;1, NLM6, NLM8 | NOD26-like intrinsic protein 5;1 | chr4:6431530-6434510 REVERSE LENGTH=304