MLOC_64888 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.283711.217112.813.1217
LEAShoots from the seedlings (10 cm shoot stage)0.7352972.4878401.38238
INF1Young developing inflorescences (5mm)1.008852.103940.6002511.22525
INF2Developing inflorescences (1-1.5 cm)0.4266041.14470.6462780.968235
ROORoots from the seedlings (10 cm shoot stage)36.227623.222938.184432.6598
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)1.81692.217981.370392.02363
CAR15Developing grain, bracts removed (15 DPA)8.023287.945016.9365320.4893



CDS Structure of MLOC_64888






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64888.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64888.1CUST_14759_PI427708080AvailableAvailablecontig_49461 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g54240.1 -1 1e-43 146 75/90 (83%) 13104.m05607 protein wound induced protein, putative, expressed
TAIR PP10 AT4G10270.1 -1 4e-24 95 47/91 (52%) Wound-responsive family protein | chr4:6374805-6375077 FORWARD LENGTH=90