MLOC_64885 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.357681.697161.590981.62895
LEAShoots from the seedlings (10 cm shoot stage)0.959960.3166710.4107520.513028
INF1Young developing inflorescences (5mm)3.133613.345542.817162.57848
INF2Developing inflorescences (1-1.5 cm)1.67111.900991.658641.99364
ROORoots from the seedlings (10 cm shoot stage)0.4772140.9182420.4976331.05102
NODDeveloping tillers at six leaf stage, 3rd internode0.06873680.05408530.1473860.243734
CAR5Developing grain, bracts removed (5 DPA)0.7142781.208921.260611.10568
CAR15Developing grain, bracts removed (15 DPA)0.2188040.3337390.1428630.577114



CDS Structure of MLOC_64885






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64885.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64885.3CUST_14758_PI427708080AvailableAvailablecontig_49460 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g41550.1 +3 0.0 564 353/453 (78%) 13104.m04078 protein CRS1/YhbY domain containing protein, putative, expressed
TAIR PP10 AT3G25440.2 +3 9e-106 330 205/362 (57%) RNA-binding CRS1 / YhbY (CRM) domain protein | chr3:9224294-9225505 FORWARD LENGTH=380