- Predicted Gene MLOC_64881
MLOC_64881 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 18.3209 | 16.8387 | 16.4281 | 18.6625 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 20.0129 | 5.98392 | 5.31451 | 8.5905 |
| INF1 | Young developing inflorescences (5mm) | 12.4825 | 14.2836 | 12.7275 | 12.3376 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.3089 | 10.1885 | 9.96792 | 12.6725 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 26.2315 | 24.3776 | 17.272 | 28.5434 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 15.0157 | 23.8824 | 27.2732 | 73.0981 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.55393 | 7.67886 | 7.04081 | 8.02392 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.936627 | 0.874549 | 0.965937 | 2.41211 |
CDS Structure of MLOC_64881
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64881.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g40180.1 |
-1 |
0.0 |
783 |
483/546 (88%) |
13108.m04294 protein 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed |
| TAIR PP10 |
AT1G76490.1 |
-1 |
0.0 |
667 |
393/544 (72%) |
| Symbols: HMG1, HMGR1, AtHMGR1 | hydroxy methylglutaryl CoA reductase 1 | chr1:28695801-28698206 FORWARD LENGTH=642 |
