MLOC_64867 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.227118.579222.082520.0079
LEAShoots from the seedlings (10 cm shoot stage)31.461618.710426.83320.1728
INF1Young developing inflorescences (5mm)8.9258511.15847.475648.48978
INF2Developing inflorescences (1-1.5 cm)6.831045.951056.901597.45638
ROORoots from the seedlings (10 cm shoot stage)21.052416.839516.970118.6965
NODDeveloping tillers at six leaf stage, 3rd internode51.97764.219834.4173139.003
CAR5Developing grain, bracts removed (5 DPA)18.722916.218516.739117.5735
CAR15Developing grain, bracts removed (15 DPA)0.8883130.7787450.8078522.11028



CDS Structure of MLOC_64867






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64867.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366747NoneNoneNoneNone
MLOC_64867.2CUST_5061_PI427708080AvailableAvailablecontig_49437 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g50960.1 +2 0.0 994 542/597 (91%) 13102.m05785 protein auxin efflux carrier component, putative, expressed
TAIR PP10 AT1G73590.1 +2 0.0 694 380/645 (59%) | Symbols: PIN1, ATPIN1 | Auxin efflux carrier family protein | chr1:27659772-27662876 FORWARD LENGTH=622