MLOC_64864 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.502217.945116.26714.8857
LEAShoots from the seedlings (10 cm shoot stage)14.318812.925413.946111.1746
INF1Young developing inflorescences (5mm)28.116428.27628.463721.5586
INF2Developing inflorescences (1-1.5 cm)21.759224.52722.737623.6339
ROORoots from the seedlings (10 cm shoot stage)11.399815.593715.384416.8786
NODDeveloping tillers at six leaf stage, 3rd internode10.422611.107812.068136.8577
CAR5Developing grain, bracts removed (5 DPA)20.145119.989221.04118.2665
CAR15Developing grain, bracts removed (15 DPA)14.037412.126112.60627.1155



CDS Structure of MLOC_64864






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64864.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361324NoneNoneNoneNone
MLOC_64864.1CUST_5060_PI427708080AvailableAvailablecontig_49435 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g13630.1 +1 0.0 908 497/609 (82%) 13109.m01253 protein ZOS9-03 - C2H2 zinc finger protein, expressed
TAIR PP10 AT5G51230.1 +1 5e-169 509 320/628 (51%) | Symbols: EMF2, VEF2, CYR1, AtEMF2 | VEFS-Box of polycomb protein | chr5:20824153-20829344 FORWARD LENGTH=631