MLOC_64857 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.647616.366316.711117.8619
LEAShoots from the seedlings (10 cm shoot stage)10.42979.731714.22928.88937
INF1Young developing inflorescences (5mm)1.995092.601574.15542.65378
INF2Developing inflorescences (1-1.5 cm)0.6844640.8468361.354881.07236
ROORoots from the seedlings (10 cm shoot stage)30.666824.438414.495425.782
NODDeveloping tillers at six leaf stage, 3rd internode34.13430.504328.483377.015
CAR5Developing grain, bracts removed (5 DPA)6.188125.863775.250666.01346
CAR15Developing grain, bracts removed (15 DPA)0.7704120.6750690.7641131.88301



CDS Structure of MLOC_64857






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64857.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363916NoneNoneNoneNone
MLOC_64857.1CUST_5057_PI427708080AvailableAvailablecontig_49414 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g04000.1 +3 0.0 935 487/543 (90%) 13103.m00406 protein AMP-binding domain containing protein, expressed
TAIR PP10 AT1G20510.1 +3 0.0 659 341/546 (62%) | Symbols: OPCL1 | OPC-8:0 CoA ligase1 | chr1:7103645-7105856 REVERSE LENGTH=546