- Predicted Gene MLOC_64825
MLOC_64825 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.291603 | 0.072602 | 0.142598 | 0.115459 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.221066 | 0.426541 | 0.265737 | 0.144032 |
| INF1 | Young developing inflorescences (5mm) | 0.116128 | 0.31384 | 0.17106 | 0.114663 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.0418888 | 0.212732 | 0.0547828 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.310516 | 0.275773 | 0.196836 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0542381 | 0.365379 | 0.321365 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.341215 | 0.208402 | 0.248397 | 0.170435 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_64825
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64825.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g08500.1 |
+3 |
1e-57 |
160 |
80/149 (54%) |
13101.m00890 protein transposon protein, putative, Pong sub-class |
| TAIR PP10 |
AT2G13770.1 |
+3 |
5e-23 |
100 |
48/99 (48%) |
CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); Has 451 Blast hits to 352 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 8; Plants - 388; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). | chr2:5736603-5737847 FORWARD LENGTH=343 |