MLOC_64774 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains70.081258.38663.050846.0046
LEAShoots from the seedlings (10 cm shoot stage)32.99523.983929.297518.1266
INF1Young developing inflorescences (5mm)85.99577.310888.593350.8476
INF2Developing inflorescences (1-1.5 cm)55.992153.461266.79746.9967
ROORoots from the seedlings (10 cm shoot stage)50.436240.477870.772436.4593
NODDeveloping tillers at six leaf stage, 3rd internode8.991244.9994321.145417.8459
CAR5Developing grain, bracts removed (5 DPA)54.420363.604952.75739.4717
CAR15Developing grain, bracts removed (15 DPA)18.74315.005113.580129.2095



CDS Structure of MLOC_64774






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64774.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353829NoneNoneNoneNone
MLOC_64774.1CUST_5037_PI427708080AvailableAvailablecontig_49305 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g03090.1 -3 1e-86 279 137/145 (94%) 13112.m00263 protein ribosomal protein, putative, expressed
TAIR PP10 AT2G09990.1 -3 1e-67 225 107/144 (74%) Ribosomal protein S5 domain 2-like superfamily protein | chr2:3781442-3781882 FORWARD LENGTH=146