MLOC_6476 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 16.6529 | 24.3303 | 20.659 | 18.3516 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 53.3094 | 111.381 | 100.804 | 62.9407 |
| INF1 | Young developing inflorescences (5mm) | 17.5408 | 19.17 | 15.0598 | 12.7914 |
| INF2 | Developing inflorescences (1-1.5 cm) | 10.6246 | 11.1641 | 9.49476 | 10.2251 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 25.2394 | 24.7325 | 23.6159 | 25.0315 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.5172 | 13.8058 | 12.5471 | 38.3337 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 31.556 | 31.9816 | 33.9156 | 26.9204 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 27.9874 | 31.9322 | 19.5215 | 55.9409 |
CDS Structure of MLOC_6476
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6476.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g39350.1 |
-1 |
0.0 |
887 |
469/698 (67%) |
13108.m04197 protein glycerophosphoryl diester phosphodiesterase family protein, putative, expressed |
| TAIR PP10 |
AT5G55480.1 |
-1 |
0.0 |
655 |
340/696 (49%) |
| Symbols: SVL1 | SHV3-like 1 | chr5:22474277-22477819 FORWARD LENGTH=766 |
