MLOC_64754 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.148514.041712.30429.77417
LEAShoots from the seedlings (10 cm shoot stage)13.967210.909713.73498.6693
INF1Young developing inflorescences (5mm)25.245229.382227.095316.0314
INF2Developing inflorescences (1-1.5 cm)23.942923.913919.68318.8395
ROORoots from the seedlings (10 cm shoot stage)19.839814.250414.606214.2037
NODDeveloping tillers at six leaf stage, 3rd internode4.312155.382059.6954515.3417
CAR5Developing grain, bracts removed (5 DPA)20.414523.876321.915915.1528
CAR15Developing grain, bracts removed (15 DPA)6.685186.716677.8175810.6762



CDS Structure of MLOC_64754






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64754.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64754.1CUST_12959_PI427708083AvailableAvailablecontig_492812 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g43890.1 +2 4e-67 224 107/121 (88%) 13103.m04721 protein WD domain, G-beta repeat domain containing protein, expressed
TAIR PP10 AT5G58230.1 +2 2e-62 210 99/122 (81%) | Symbols: MSI1, MEE70, ATMSI1 | Transducin/WD40 repeat-like superfamily protein | chr5:23556112-23557994 FORWARD LENGTH=424